Critical Issue
If the system clock and the reference clock for your RapidIO MegaCore function are driven by the same source, the Quartus II software issues a critical warning.
This issue has no design impact. The critical warning can be ignored.
You can avoid the critical warning by cutting some of the nodes in the Synopsys Design Constraints File (.sdc). To obtain an .sdc compatible list of the nodes to be cut, refer to Altera solution rd07132010_207 at www.altera.com/support/kdb/solutions/rd07132010_207.html.
This issue will be fixed in a future version of the RapidIO MegaCore function.