Description
Due to a problem in the Quartus® Prime Pro Edition Software version 24.1, you may see duplicated file warnings during Agilex™ 5 GTS JESD204C FPGA IP generation when the JESD204C wrapper is set to 'PHY only' or 'Both Base and PHY'.
Resolution
This warning doesn't pose any risk on functionality.
This problem is fixed beginning with the Quartus® Prime Pro Edition Software version 24.3.