Yes, in the BSDL file for a Cyclone® III EP3C120 (EP3C120F484) version 1.02 there is a typo where it states pin E60 in the section that states "You must run the Boundary Scan test in post-configuration mode if any of the following pins is connected to any termination resistor: F7, C18, AA20, Y4, V5, F15, F9, AB20, E60." The E60 pin should actually be pin E16. This does not impact the operation of the BSDL file.
This will be corrected in a future version of the BSDL file.